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vtk
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Edit on GitHub
Applications
¶
AMD
¶
amdblis
amdfftw
amdlibflame
amdlibm
amdscalapack
Audio/Visualization
¶
ffmpeg
gmt
gnuplot
paraview
visit
vlc
vtk
Bioinformatics
¶
bamtools
beagle
beast2
bismark
blast-plus
bowtie2
bwa
cufflinks
cutadapt
fastqc
fasttree
fastx-toolkit
gatk
htseq
mrbayes
nf-core
perl-bioperl
picard
samtools
sratoolkit
tophat
trimmomatic
vcftools
Climate
¶
cdo
ncl
Computational chemistry
¶
amber
cp2k
gromacs
lammps
namd
nwchem
quantum-espresso
vasp
vmd
wannier90
Fluid dynamics
¶
openfoam
Geospatial tools
¶
gdal
geos
grads
proj
Libraries
¶
arpack-ng
blis
boost
eigen
fftw
gmp
gsl
hdf5
hdf
intel-mkl
libfabric
libflame
libiconv
libmesh
libszip
libtiff
libv8
libx11
libxml2
mpfr
netcdf-c
netcdf-cxx4
netcdf-fortran
netlib-lapack
openblas
parallel-netcdf
petsc
swig
ucx
zlib
Mathematical/Statistics
¶
gurobi
jupyter
matlab
meep
octave
r
rstudio
ML toolkit
¶
learning
nco
py-mpi4py
python
spark
NVIDIA
¶
cuda
cudnn
nccl
nvhpc
Programming languages
¶
julia
tcl
System
¶
cue-login-env
modtree
xalt
Text Editors
¶
vscode
Tools/Utilities
¶
anaconda
aws-cli
cmake
curl
emacs
gdb
gpaw
hadoop
hpctoolkit
hwloc
launcher
monitor
mpc
ncview
numactl
openjdk
papi
parafly
protobuf
qemu
qt
texlive
tk
totalview
valgrind
Workflow automation
¶
hyper-shell
nextflow
parallel
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